Клонирование симбиотических генов гороха посевного (Pisum sativum L.) с использованием синтении геномов бобовых растений
Диссертация
Полученные в диссертационной работе данные, свидетельствующие о вовлечении в сигнальные взаимодействия между бактериями и растениями нескольких рецепторных киназ, повышающих специфичность взаимного узнавания, а также об участии белковых регуляторов растения при формировании клубеньковых меристем, могут быть использованы для построения моделей взаимодействия генов (в том числе взаимодействия генов… Читать ещё >
Содержание
- Глава 1. Генетический контроль развития бобово-ризобиального симбиоза со стороны растения (обзор литературы)
- 1. 1. Основные стадии развития бобово-ризобиальпого симбиоза
- 1. 1. 1. Взаимовыгодные симбиозы, образуемые бобовыми растениями
- 1. 1. 2. Специфичность азотфиксирующего симбиоза бобовых растений
- 1. 1. 3. Инициация взаимодействия при АФС
- 1. 1. 3. 1. «Молекулярный диалог» между макро- и микросимбионтом
- 1. 1. 3. 2. Nod-фактор, важнейшая сигнальная молекула АФС
- 1. 1. 3. 3. Комплексность сигнальных систем АФС.'
- 1. 1. 4. Ранние этапы взаимодействия при АФС
- 1. 1. 4. 1. Физиологические изменения в растении
- 1. 1. 4. 2. Рост инфекционной нити — эпидермальная программа развития
- 1. 1. 4. 3. Развитие клубенькового примордия — кортикальная программа развития
- 1. 1. 5. Поздние стадии развития АФС
- 1. 1. 5. 1. Эпдоцитоз бактерий из ИН
- 1. 1. 5. 2. Образование симбиосом
- 1. 1. Основные стадии развития бобово-ризобиальпого симбиоза
Список литературы
- Бердников В.А., Розов С.М, Богданова B.C. Создание серии лабораторных линий гороха // Тезисы докладов конференции, 23−23 мая 1989 года. Частная генетика растений. Киев, 1989 Т. 2, С. 47−51.
- Борисов А.Ю., Розов С. М., Цыганов В. Е., Куликова О. А., Колычева А.Н., Якоби
- Л.М., Овцына А. О., Тихонович И. А. Выявление симбиотических генов горохаt
- Pisum sativum L.) с использованием экспериментального мутагенеза // Генетика. 1994. V. 30. № 11. С. 1484−1494.
- Воронин А.М. Ризосферные бактерии рода Pseudomonas, способствующие росту и развитию растений// Соросовский Образовательный Журнал. 1998. № 10. С. 25−31.
- Вавилов Н.И. Закон гомологических рядов в наследственной изменчивости. В сб.: Н. И. Вавилов. Избранные произведения. JL, 1967. № 1, С. 8−61.
- Ворошилова В.А. Генетический анализ процесса развития симбиотических клубеньков у гороха посевного (Pisum sativum L.) Диссертация на соискание ученой степени канд.биол.наук. СПб, СПбГУ, 2002. 160 с.
- Ежова Т.А., Лебедева О. В., Огаркова О. А., Пенин А. А., Солдатова О. П., Шестаков С.В. Arabidcpsis thaliana модельный объект генетики растений: учебно-методическое пособие по генетике растений // М., МАКС Пресс, 2003. 220 с.
- Каратыгин И.В. Коэволюция грибов и растений // Труды Ботан. ин-та РАН. 1993. Вып. 9. С. 8−62.
- Малышев С.В., Картель Н. А. Молекулярные маркеры в генетическом картировании растений // Молекулярная биология. 1997. Т. 31. № 62. С. 197−208.
- Мендель Г. Опыты над растительными гибридами. М.: Наука, 1965. 159 с.
- Проворов Н.А., Тихонович И. А. Мутуалистические симбиозы (генетическая интеграция растений и микроорганизмов) // В Кн. Генетика развития растений / Под ред. чл.-кор. РАН С.Г. Инге-Вечтомова. СПб.: Наука, 2000. 539 с.
- Разумовская 3. Г. Образование клубеньков у различных сортов гороха // Микробиология. 1937. Т. 6. № 3. С. 321−328.
- Серебровский А.С. Генетический анализ // Москва: Наука, 1970. 145 с.
- Сидорова К.К., Шумный В. К. Новый ген гороха (Pisum sativum L.) Nod5-nod5, контролирующий нодулядию // Докл. АН. 1997. Т. 353. № 5. С. 703−704.
- Сидорова К.К., Шумный В. К. Создание и генетическое изучение коллекции симбиотических мутантов гороха (Pisum sativum L.) // Генетика. 2003. Т. 39. № 4. С. 501−509.
- Четкова С.А., Тихонович И. А. Выделение и исследование штаммов Rhizobium legwninosarum, эффективных на горохах афганского происхождения П Микробиология. 1986. Т. 55. С. 143 147.
- Albrecht С., Geurts R., Bisseling Т. Legume nodulation and mycorrhizal formation- two extremes in host specificity meet // The EMBO Journal. 1999. V. 18. N. 2. P. 281−288.
- Albrecht C., Geurts R., Lapeyrie F., Bisseling T. Endomycorrhizae and rhizobial Nod factors both require SYM8 to induce the expression of the early nodulin genes PsENOD5 andPsENOD12A. //Plant J. 1998. V. 15. P. 605−614.
- Ane J.M., Kiss G.B., Riely B.K., Penmetsa R.V., Oldroyd G.E., Ayax C., Levy J., Debelle F., Baek J.M., Kalo P., Rosenberg C., Roe B.A., Long S.R., Denarie J., Cook
- D.R. Medicago truncatula DMI1 required for bacterial and fungal symbioses in legumes // Science. 2004. V. 303. N. 5662. P. 1364−1367.
- Baumbusch L.O., Sundal I.K., Hughes D.W., Galau G.A., Jakobsen K.S. Efficient protocols for CAPS-based mapping in Arabidopsis II Plant Mol. Biol. Rep, 2001. V. 19. P. 137−149.
- Benabcn V., Due G., Lefcbre V., Huguet Т. TE7, an inefficient symbiotic mutant of Medicago truncatula Gaertn. cv. Jemalong 11 Plant Physiol. 1995. V. 107. P. 53−62.
- Bennett M.D., Leitch I.J. Plant genome size research: a field in focus // Ann. Bot. (Lond). 2005. V. 95.N. l.P. 1−6.
- Bergman K., Gulash-Hoffee M., Hovestadt R.E., Larosiliere R.C., Rongo P.G., Su L. Physiology of behavorial mutants of Rhizobium meliloti: evidence for a dual chemotaxis pathway//J. Bacteriol. 1988. V. 170. P. 3249−3254.
- Blauenfeldt J., Joshi P.A., Gresshoff P.M., Caetano-Anolles G. Nodulation of white clover {Tr, folium repens) in the absence of Rhizobium И Protoplasma 1994. V. 179. P. 106−110.
- Borisov A.Y., Morzhina E.V., Kulikova O.A., Tchetkova S.A., Lebsky V.K., Tikchonovich I.A. New symbiotic mutants of pea (Pisum sativum L.) affecting either nodule initiation or symbiosome development// Symbiosis. 1992. V. 14. P. 297−313.
- Brauner S., Murphy R.L., Walling J.G., Przyborowski J., Weeden, N.F. STS markers for comparative mapping in legumes // J. Amer. Soc. Hort. Sci. 2002. V. 127. N. 4. P. 616 622.
- Brewin N.J. Development of the legume root nodules // Ann. Rev. Cell Biol. 1991. V. 7. P. 191−226.
- Caetano-Anolles G., Crist-Estes D.K., Bauer W.D. Chemotaxis of Rhizobium meliloti to the plant flavonc luteolin requires functional nodulation genes // J. Bacteriol. 1988. V. 170. P. 3164−3169.
- Caetano-Anolles G., Gresshoff P.M. Plant genetic control of nodulation // Annu. Rev. Microbiol. 1991. V. 45. P. 345−382.
- Cartwright D.A., Troggio M., Velasco R., Gutin A. Genetic mapping in the presence of genotyping errors // Genetics. 2007. V. 176. N. 4. P. 2521−2527.
- Catoira R., Timmers A.C.J, Maillet F., Galera C., Penmetsa R.V., Cook D., Denarie J., Gough C. The LICL gene of Medicago truncatula controls Rhizobium-induced root hair curling // Development. 2001. Y. 128. P. 1507−1518.
- Cermola M., Fedorova E., Tate R., Riccio A., Favre R., Patriarca E.J. Nodule invasion and symbiosome differentiation during Rhizobium elti Phaseolus vulgaris symbiosis // Mol. Plant-Microbe Interact. 2000. V. 13. P. 733−741.
- Cheng H.-P., Walker G. Succinoglycan is required for initiation and elongation of infection threads during nodulation of alfalfa by Rhizobium meliloti II J. Bacteriol. 1998. V. 180. P.5183−5191.
- Cikos S, Bukovska A, Koppcl J. Relative quantification of mRNA: comparison of methods currently used for real-time PCR data analysis // BMC Mol. Biol. 2007. V.8. N. 113. P. 1−14.
- Cohn J., Day R.B., Stacey G. Legume nodule organogenesis // Elsevier Science Ltd. 1998. Vol. 3, No. 3. P. 105−110.
- Cook D.R. Medicago truncatula a model in the making! // Curr. Opin. Plant Biol. 1999. V.2.N.4. P. 301−304.
- Corley S.B., Carpenter R., Copsey L., Coen E. Floral asymmetry involves an interplay between TCP and MYB transcription factors in Antirrhinum И Proc. Natl. Acad. Sci. USA. 2005. V. 102. N. 14. P. 5068−5073.
- Crespi M., Galves S. Molecular mechanisms in root nodule development // J. Plant Growth Regul. 2000. Vol. 19. P. 155−166.
- Davis E.O., Evans I.J., Johnston A.W.' Identification of nodX, a gene that allows Rhizobium leguminosarum bv. viciae strain TOM to nodulate Afghanistan peas // Mol. Gen. Genet. 1988. V. 212. N.3. P.531−535.
- Demont N., Debelle F., Aurelle H., Denarie J., Prome J.C. Role of the Rhizobium meliloti nodF and nodE genes in the biosintesis of lipo-oligosaccharidic nodulation factors // J. Biol. Chem. 1993. V. 268. No. 27. P. 20 134−20 142.
- Denarie J., Debellc F., Prome J.C. Rhizobium Lipo-cliitooligosaccaride nodulation factors: signaling molecules mediating recognition and morphogenesis // Annu. Rev. Biochem. 1996. V. 65. P. 503−535.
- Downie J.A. Infectious Heresy// Science. 2007. V. 316. N. 5829. P. 1296−1297.
- Doyle J.J., Luckow M.A. The rest of the iceberg. Legume diversity and evolution in a phylogenetic context // Plant Physiol. 2003. V. 131. N. 3. P. 900−910.
- Due G., Messager A. Mutagenesis of pea (Pisum sativum L.) and the isolation of mutants for nodulation and nitrogen fixation // Plant Sci. 1989. V. 60. P. 207−213.
- Edwards A., Hcckmann A.B., Yousafzai F., Due G., Downie J.A. Structural implications of mutations in the pea SYM8 symbiosis gene, the DMI1 ortholog, encoding a predicted ion channel //Mol. Plant Microbe Interact. 2007. V. 20. N. 10. P. 1183−1191.
- Ehrhardt D.W., Atkinson E.M., Long S.R. Depolarization of alfalfa root hair membrane potential by Rhizobium meliloti Nod factors // Science. 1992. V. 256. P. 998−1000.
- Ellis Т.Н., Turner L., Hellens R.P., Lee D., Harker C.L., Enard C., Domoney C., Davies D.R. Linkage maps in pea // Genetics. 1992. V. 130. N. 3. P. 649−663.
- Endre G., Kereszt A., Kevei Z., Mihacea S., Kalo P., Kiss G.B. A receptor kinase gene regulating symbiotic nodule development //Nature. 2002. Vol. 417. P. 962−966.
- Engvild K.J. Nodulation and nitrogen fixation mutants of pea (Pisum sativum) // Theor. ^ Appl. Genet. 1987. Vol. 74. P. 711−713.
- Esseling J.J., Lhuisser F.G., Emons A.M. Nod-factor induced root hair curling: continuous polar growth towards the point of Nod-factor application // Plant Physiol. 2003. V. 132. P. 1982−1988.
- Felle H.H., Kondorosi E., Kondorosi A., Schultze M. The role of ion fluxes in Nod factor signalling inMedicago sativa // Plant J. 1998. V. 13. P. 455−463.
- Ferguson B.J., Mathesius U. Signaling interactions during nodule development // J. Plant Growth Regul. 2003. V. 22. P. 47−72.
- Fitch W. M. Distinguishing Homologous from Analogous Proteins // Systematic Zoology. 1970. V. 19. N. 2. P. 99−113.
- Flavell A.J., Knox M.R., Pearce S.R., Ellis Т.Н. Rctrotransposon-based insertion polymorphisms (RBIP) for high throughput marker analysis // Plant J. 1998. V. 16. N. 5. P. 643−650.
- Flor H.H. Inheritance of reaction to rust in flax // J. Agric. Res. 1947. V. 74. P. 241−262.
- Gage D.J., Margolin W. Hanging by a thread: invasion of legume plants by rhizobia // Curr. Opin. Microbiol. 2000. V. 3. P. 613−617.
- Gage D.J. Infection and invasion of roots by symbiotic, nitrogen-fixing rhizobia during nodulation of temperate legumes // Microbiol. Mol. Biol. Rev. 2004. Vol. 68. N. 2. P. 280−300.
- Gelin O., Blixt S. Root nodulation in peas // Agri. Hort. Genet. 1964. V. 22. P. 149−159.
- Geurts R., Bisseling T. Rhizobium Nod factor perception and signalling // The Plant Cell. 2002. V. 14. P. 239−249.
- Gianinazzi-Pearson V. Plant cell responses to arbuscular mycorrhizal fungi: getting to the roots of the symbiosis // Plant Cell. 1996. V. 8. P. 1871−1883.
- Gilpin В .J., McCallum J.A., Frew T.J., Timmerman-Vaughan G.M. A linkage map of the pea (Pisum sativum L.) genome containing cloned sequences of known function and expressed sequence tags (ESTs) // Theor. Appl. Genet. 1997. V. 95. P. 1289−1299.
- Gleason C., Chaudhuri S., Yang Т., Munoz A., Poovaiah B.W., Oldroyd G.E. Nodulation independent of rhizobia induced by a calcium-activated kinase lacking autoinhibition // Nature. 2006. V. 441. N. 7097. P. 1149−1152.
- Goetz R., Evans I. J., Downie J.A., Johnston A.W.B. Identification of the host-range DNA which allows Rhizobium leguminosarum strain TOM to nodulate cv. Afghanistan peas // Mol. Gen. Genet. 1985. V. 201. N. 2. P. 296−300.
- Gonzalez-Rizzo S., Crespi M., Frugier F. The Medicago truncatula CRE1 cytokinin receptor regulates lateral root development and early symbiotic interaction with Sinorhizobium meliloti // Plant Cell. 2006. V. 18. N. 10. P. 2680−2693.
- Grant D., Cregan P., Shoemaker R.C. Genome organization in dicots: genome duplication in Arabidcpsis and syntcny between soybean and Arabidopsis II Proc. Natl. Acad. Sci. USA. 2000 V. 97. P. 4168−4173.
- Gresshoff P.M. Positional Cloning of Plant Developmental Genes. // The Handbook of Plant Genome Mapping. Genetic and Physical Mapping / Eds.: Meksem K., Kahl G. Wiley-VCH, Weinheim, 2005.
- Gualtieri G., Kulikova O., Limpens E., Kim D.J., Cook D.R., Bisseling Т., Geurts R. Microsynteny between pea and Medicago truncatula in the SYM2 region // Plant Mol. Biol. 2002. V. 50. N. 2. P. 225−235.
- Guinel F.C., Geil R.D. A model for the development of the rhizobial and arbuscular mycorrhizal symbioses in legumes and its use to understand the roles of ethylene in the establishment of these two symbioses // Can. J. Bot. 2002. V. 80. P. 695−720
- Handberg K., Stougaard J. Lotus japonicus, an autogamous, diploid legume species for classical and molecular genetics II Plant J. 1992. V. 2. P. 487−496.
- Harrison M.J. The arbuscular mycorrhizal symbiosis // Plant-Microbe Interactions / Eds Stacey G., KeenN.T.- New York: Chapman and Hall. 1997. P. 1−34.
- Hartwig H.A., Joseph C.M., Phillips D.A. Flavonoids released naturally from alfalfa seeds enhance growth rate of Rhizobium meliloti II Plant Physiol. 1991. V. 95. P. 797 803.
- Hass-Jacobus В., Jackson S.A. Physical Mapping of Plant Chromosomes // The Handbook of Plant Genome Mapping. Genetic and Physical Mapping / Eds.: Meksem K., Kahl G. Wiley-VCH, Weinheim, 2005
- Hecht V., Foucher F., Ferrandiz C., Macknight R., Navarro C., Morin J., Vardy M.E., Ellis N., Beltran J.P., Rameau C., Weller J.L. Conservation of Arabidcpsis flowering genes in model legumes // Plant Physiol. 2005. V. 137. N. 4. P. 1420−1434.
- Heidstra R., Geurts R., Franssen H., Spaink H.P., van Kammen A., Bisseling T. Root hair deformation activity of nodulation factors and their fate on Vicia sativa I I Plant Physiol. 1994. V. 105. P. 787−797.
- Hellemans J., Mortier G., De Pacpe A., Speleman F., Vandesompele J. qBase relative quantification framework and software for management and automated analysis of realtime quantitative PCRdata// Genome Biol. 2007. V. 8. N.2. R 19 (epub).
- Hepworth S.R., Zhang Y., McKim S., Li X., Haughn G.W. BLADE-ON-PETIOLE-dependent signaling controls leaf and floral patterning in Arabidcpsis II Plant Cell. 2005. V. 17. N. 5. P. 1434−1448.
- Hirsch A.M. Developmental biology of legume nodulation // New Phytol. 1992. V. 122. P. 211−237.
- Hirsch A.M. What makes the Rhizobia-legume symbiosis so special? // Plant Physiol. 2001. V. 127. P. 1484−1492.
- Hirsch A.M., LaRue T.A. Is the legume nodule a modified root or stem or an Organ sui generis? // 1997. V. 16. N.4. P. 361−392.
- Holl F.B. Host-plant control of the inheritance of dinitrogen fixation in the Pisum-Rhizobium symbiosis // Euphytica. 1975. V. 24. P. 767−770
- Hungria M., Joseph C.M., Phillips D.A. Rhizobium nod gene inducers exuded naturally from roots of common bean (Phaseolus vulgaris L.) // Plant Physiol. 1991. V. 97. P. 759 764.
- Irzikowska L., Wolko В., Swi? cicki W.K. The genetic linkage map of pea (Pisum sativum L.) based on molecular, biochemical and morphological markers // Pisum Genetics. 2001. V. 33. P. 13−18.
- Jacobsen E., Feenstra W.J. A new pea mutant with efficient nodulation in the presence of nitrate // Plant Sci. Letters. 1984. V. 33. P. 337−344
- Kalo P., Seres A., Taylor S.A., Jakab J., Kevei Z., Kereszt A., Endre G., Ellis Т.Н., Kiss G.B. Comparative mapping between Medicago sativa and Pisum sativum 11 Mol. Genet. Genomics. 2004. V. 272. N. 3. P. 235−246.
- Kijne J.M. The Rhizobium infection process // Biological Nitrogen Fixation / New York- London, 1992. P. 349−398.
- Kiss G.B., Kereszt A., Kiss P., Endre G. Colormapping: a nonmathematical procedure for genetic mapping // Acta Biol. Hun. 1998. V. 49. P. 125−142.
- Kneen B.E., LaRue T.A. Nodulation resistant mutant of Pisum sativum L. // J. Hered. 1984a. V. 75. P. 238−240.
- Kneen B.E., LaRue T.A. Peas (Pisum sativum L.) with strain specificity for Rhizobium leguminosarum // Heredity. 1984b. V. 52. P. 383−389.
- Kneen B.E., LaRue T.A. Induced symbiosis mutants of pea (Pisum sativum) and sweetclover (Melilotus alba annua) // Plant Sci. 1988. V. 58. P. 177−182.
- Kneen B.E., LaRue T.A., Hirsch A.M., Smith C.A., Weeden N.F. sym-13 A gene conditioning ineffective nodulation in Pisum sativum. II Plant Physiol. 1990. V. 94. P. 899−905.
- Kneen B.E., Weeden N.F., LaRue T.A. Non-nodulating mutants of Pisum sativum (L.) cv. Sparkle //J. Hered. 1994. V. 85. P. 129−133.
- Konieczny A., Ausubel F.M. A procedure for mapping Arabidcpsis mutations using co-dominant ecotype-specific PCR-based markers // Plant J. 1993. V. 4. N. 2. P. 403−410.
- Konovalov F., Toshchakova E., Gostimsky S. A CAPS marker set for mapping in linkage group III of pea (Pisum sativum L.) // Cell. Mol. Biol. Lett. 2005. V. 10. N. 1. P. 163 171.
- Koroleva T.A., Voroshilova V.A., Tsyganov V.E., Borisov A.Y., Tikhonovich I.A. Symbiotic locus Sym38 is localized in linkage group V // Pisum Genet. 2001. V. 33. P. 30−31.
- Kosterin O.E., Rozov S.M. Mapping of the new mutation bib and the problem of integrity of linkage group I // Pisum Genet. 1993. V. 25. P. 27−31.
- Kropf D.L., Bisgrove S.R., Hable W. Cytoskeletal control of polar growth in plant cells // Curr. Op. Cell Biol. 1998. V. 10. P. 117−122.
- Krusell L., Krause K., Ott Т., Desbrosses G., Kramer U., Sato S., Nakamura Y., Tabata S., James E.K., Sandal N., Stougaard J., Kawaguchi M., Miyamoto A., Suganuma N.,
- Udvardi M.K. The sulfate transporter SST1 is crucial for symbiotic nitrogen fixation in Lotus japonicus root nodules // Plant Cell. 2005. V. 17. N. 5. P. 1625−1636.
- Kulikova 0., Gualtieri G., Geurts R., Kim D.J., Cook D., Huguet Т., de Jong J.H., Fransz P.F., Bisseling T. Integration of the FISH pachytene and genetic maps of Medicago truncatula // Plant J. 2001. V. 27. N.l. P. 49−58.
- Kumagai H., Kinoshita E., Ridge R.W., Kouchi H. RNAi knock-down of ENOD40s leads to significant suppression of nodule formation in Lotus japonicus II Plant Cell Physiol. 2006. V. 47. N. 8. P. 1102−1111.
- Kumar A., Bennetzen J.L. Plant retrotransposons // Annu Rev Genet. 1999. V. 33. P. 479−532.
- Kuster H., Vieweg M.F., Manthey K., Baier M.C., Hohnjec N., Perlick A.M. Identification and expression regulation of symbiotically activated legume genes // Phytochemistry. 2007. V. 68. N. 1. P. 8−18.
- LaRue T.A., Weeden N.F. The symbiosis genes of pea// Pisum Genetics. 1992. V. 24. P. 5−12.
- LaRue T.A., Temnykh S., Weeden N.F. Syml8 a novel gene conditioning altered strain specificity in Pisum sativum cv. Sparkle // Plant Soil. 1996. V. 180. P. 191−195.
- Laucou V., Haurogne K., Ellis N., Rameau C. RAPD-based genetic linkage map of Pisum sativum II Theor. Appl. Genet. 1998. V. 97. P. 905−915.
- Libbenga K.R., Harkes P.A.A. Initial proliferation of cortical cell the formation of root nodules in Pisum sativum L. II Planta. 1973. V. 114. P. 17−28.
- Lie T.A. Temperature-dependent root-nodule formation in pea cv. Iran // Plant Soil. 1971. V. 34. P. 751−752.
- Lie T.A. Symbiotic specialization in pea plants: the requirement of specific Rhizobium strains for peas from Afghanistan // Ann. Appl. Biol. 1978. V. 88. P. 462−465.
- Lie T.A., Timmermans P.C.J.M. Host genetic control of nitrogen fixation in the legume-Rhizobium symbiosis: complication in the genetic analysis due to maternal effects // Plant Soil. 1983. V. 75. P. 449−453.
- Lie T.A. Host genes in Pisum sativum L. conferring resistance to European Rhizobium leguminosarum strains // Plant Soil. 1984. V. 82. P. 415−425.
- Lie T.A., Goktan D., Engin M., Pijncnborg J., Anlarsal E. Co-evolution of the legume-Rhizobium association // Plant Soil. 1987. V. 100. P. 171−181.
- Limpens E., Franken C., Smit P., Willemse J., Bisseling Т., Geurts R. LysM domain receptor kinases regulating rhizobial Nod factor-induced infection // Science. 2003. V. 302. N. 5645. P. 630−633.
- Limpens E., Mirabella R., Fedorova E., Franken C., Franssen H., Bisseling Т., Geurts R. Formation of organelle-like N2-fixing symbiosomes in legume root nodules is controlled by DM12II Proc. Natl. Acad. Sci. USA. 2005. V. 102. N. 29. P. 10 375−10 380.
- Lum M.R., Hirsch A.M. Roots and their symbiotic microbes: strategies to obtain nitrogen and phosphorus in a nutrient-limiting environment // J. Plant Growth Regul. 2003. Vol.21. P. 368−382.
- Lysak M.A., Fransz P.F., АН H.B., Schubert I. Chromosome painting in Arabidcpsis thaliana II Plant J. 2001. V. 28. N. 6. P. 689−697.
- Markwei C.P., LaRue T.A. Phenotypic characterization of sym21, a gene conditioning shoot-controlled inhibition of nodulation in Pisum sativum cv. Sparkle // Physiol. Plantarum. 1997. V. 100. P. 927−932.
- Maxwell С., Phillips D.A. A ehaleon and two related flavonoids release from alfalfa roots induce nod gene of Rhizobium meliloti II Plant Physiol. 1989. V. 91. P. 842−847.
- Meksem K., Ishihara H., Jesse T. Integration of Physical and Genetic Maps / The Handbook of Plant Genome Mapping. Genetic and Physical Mapping // Eds.: Meksem K., Kahl G. Wiley-VCH, Weinheim, 2005
- Miller R.K., Matheos D., Rose M.D. The cortical localization of the microtubule orientation protein, Kar9p, is dependent upon actin and proteins required for polarization // J. Cell Biol. 1999. V. 144. P. 963−975.
- Murray J.D., Karas B.J., Sato S., Tabata S., Amyot L., Szczyglowski K. A cytokinin perception mutant colonized by Rhizobium in the absence of nodule organogenesis // Science. 2007. Y. 315. N. 5808. P. 101−104.
- Neff M.M., Turk E., Kalishman M. Web-based primer design for single nucleotide polymorphism analysis // Trends Genet. 2002. Y. 18. N. 12. P. 613−615.
- Newcomb W.E. Nodule morphogenesis // International Rewiew of Cytology, suppliment 13 / Eds. Bourne G.H., Danielli, J.F., Academic Press, New York, USA, 1981. P. 246 298.
- Nguyen H.T., Wu X. Molecular Marker Systems for Genetic Mapping / The Handbook of Plant Genome Mapping. Genetic and Physical Mapping // Meksem K., Kahl G. Wiley-VCH, Weinheim, 2005.
- Nishimura R., Ohmori M., Fujita H., Kawaguchi M. A Lotus basic leucine zipper protein with a RING-finger motif negatively regulates the developmental program of nodulation // Proc. Natl. Acad. Sci. USA. 2002b. V. 99. N. 23. P. 15 206−15 210.
- Norberg M., Holmlund M., Nilsson O. The BLADE ON PETIOLE genes act redundantly to control the growth and development of lateral organs // Development. 2005. V. 132. N. 9. P. 2203−2213.
- Nutman P. S. Genetic factors concerned in the symbiosis of clover and nodule bacteria // Nature, London. 1946. V. 151. P. 463−465.
- Oldroyd G.E., Downie J.A. Calcium, kinases and nodulation signalling in legumes // Nat. Rev. Mol. Cell Biol. 2004. V. 5. N. 7. P. 566−576.
- Oldroyd G.E., Downie J.A. Coordinating nodule morphogenesis with rhizobial infection in legumes // Annu. Rev. Plant Biol. 2008. V. 59. P. 519−546.
- Pawlowski K., Bisseling T. Rhizobial and Actinorhizal Symbioses: What Are the Shared Features? // The Plant Cell. 1996. V. 8. P. l899−1913.
- Penmetsa R.V., Cook D.R. A legume ethylene-insensitive mutant hyperinfected by its rhizobial symbiont// Science. 1997. V. 275. P. 527−530.
- Postma J.G., Jacobsen E., Feenstra W.J. Experiments with mutants of pea (Pisum sativum L.) // Nitrogen Fixation: Hundred Years After / Eds. Bothe H., de Bruijn F.J., Newton W.E.- Stuttgart: Gustav Fisher Verlag, 1988a. P. 629−633.
- Postma J.G., Jacobsen E., Feenstra W.J. Three pea mutants with an altered nodulation studied by genetic analysis and grafting// J. Plant Physiol. 1988b. V. 132. P. 424−430.
- Postma J.G., Jager D., Jacobsen E., Feenstra W.J. Studies on a non-fixing mutant of pea (Pisum sativum L.). 1. Phenotypical description and bacteroid activity // Plant Sci. 1990. V. 68. P. 151−161.
- Provorov N.A., Borisov A.Y., Tikhonovich I.A. Developmental genetics and evolution of symbiotic structures in nitrogen-fixing nodules and arbuscular mycorrhiza // J. Theor. Biol. 2002. V. 214. P. 215−232.
- Radutoiu S., Madsen L.H., Madsen E.B., Felle H.H., Umehara Y., Gronlund M., Sato S., Nakamura Y., Tabata S., Sandal N., Stougaard J. Plant recognition of symbiotic bacteria requires two LysM receptor-like kinases //Nature. 2003. V. 425. P. 585−592.
- Rae A.L., Bonfante-Fasolo P., Brewin N.J. Structure and growth of infection threads in the legume symbiosis with Rhizobium leguminosarum II Plant J. 1992. V. 2. P. 385−395.
- Ren C., Xu Z., Sun S., Lee M.-K., Wu C., Scheuring C., Zhang H.-B. Genomic DNA Libraries and Physical Mapping / The Handbook of Plant Genome Mapping. Genetic and Physical Mapping// MeksemK., Kahl G. Wiley-VCH, Weinheim, 2005.
- Riely B.K., Lougnon G., Anc J.M., Cook D.R. The symbiotic ion channel homolog DM11 is localized in the nuclcar membrane of Medicago truncatula roots // Plant J. 2007. V. 49. N. 2. P. 208−216.
- Rogers S.O., Bendich, A.J. Extraction of DNA from milligram amounts of fresh, herbarium and mummified plant tissues // Plant Mol. Biol. 1985. V. 5. P. 69−76.
- Roth L.E., Stacey G. Bacterium release into host cells of nitrogen-fixing soybean nodules: the symbiosome membrane comes from three sourses // Europ. J. Cell Biol. 1989. V. 49. P. 13−23.
- Rozov S.M., Temnykh S.V., Gorel F.L., Berdnikov V.A. A new version of pea linkage group 5 // Pisum Genet. 1993. V. 25. P. 46−51.
- Rozov S.M., Borisov A.Y., Tsyganov V.E. Further evidence that the mutant Fix gene in line Sprint-2Fix is in pea linkage group III.// Pisum Genet. 1994. V. 26. P. 24−25.
- Rozov S. M, Kosterin O.E., Borisov A.Y., Tsyganov V.E. The history of the pea gene map: last revolutions and the new symbiotic genes // Pisum Genet. 1999. V. 31. P. 55−57.
- Safronova V.I., Novikova N.I. Comparison of two methods for root nodule bacteria preservation: lyophilization and liquid nitrogen freezing // J. Microbiol. Methods 1996. V. 24. P. 231−237.
- Sagan M., Huguet Т., Barker D., Due G. Characterization of two classes of non-fixing mutants of pea {Pisum sativum L.) // Plant Sci. 1993. V. 95. P. 55−66.
- Sagan M., Huguet Т., Due G. Phenotypic characterization and classification of nodulation mutants of pea {Pisum sativum L.) // Plant Sci. 1994. V. 100. P. 59−70.
- Sagan M., Due G. Sym28 and Sym29, two new genes involved in regulation of nodulation in pea {Pisum sativum L.) // Symbiosis. 1996. V. 20. P. 229−245.
- Sambrook J., Fritsch E.F., Maniatis T. Molecular cloning: a laboratory manual // Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York, 1989. P. B.23.
- Schauser L., Roussis A., Stiller J., Stougaard J. A plant regulator controlling development of symbiotic root nodules //Nature. 1999. V. 402. N. 6758. P. 191−195.
- Schefc J.H., Lehmann K.E., Buschmann I.R., Unger Т., Funke-Kaiser H. Quantitative real-time RT-PCR data analysis: current concepts and the novel «gene expression’s CT difference» formula// J. Mol. Med. 2006. V. 84. N. 11. P. 901−910.
- Schnabel E.L., Frugoli J. The PIN and LAX families of auxin transport genes in Medicago truncatula II Mol. Genet. Genomics. 2004. V. 272. N. 4. P. 420−432.
- Schultze M., Kondorosi A. Regulation of symbiotic root nodule development 11 Annu. Rev. Genet. 1998. Vol. 32. P. 33−57.
- Shimizu S., Mori H. Analysis of cycles of dormancy and growth in pea axillary buds based on mRNA accumulation patterns of cell cycle-related genes // Plant Cell Physiol. 1998. V. 39.N.3. P. 255−262.
- Sidorova K.K., Uzhintseva L.P. Mapping of nod-4, a new hypernodulating mutant in pea // Pisum Genet. 1995. V. 27. P. 21.
- Sinjushin A.A., Konovalov F.A., Gostimskii, S.A. A gene for stem fasciation is localized on linkage group III 11 Pisum Genet. 2006. V. 38. P. 19−20.
- Smit G., Kijne J.W., Lugtenberg В.J. Involvement of both cellulose fibrils and a Ca2±dependent adhesin in the attachment of Rhizobium leguminosarum to pea root hair tips I I J. Bacteriol. 1987. V. 169. N. 9. P. 4294−4301.
- Smit P., Raedts J., Portyanko V., Debelle F., Gough C., Bisseling Т., Geurts R. NSP1 of the GRAS protein family is essential for rhizobial Nod factor-induced transcription // Science. 2005. V. 308. N. 5729. P. 1789−1791.
- Smit P., Limpens E., Geurts R., Fedorova E., Dolgikh E., Gough C., Bisseling T. Medicago LYK3, an entry receptor in rhizobial nodulation factor signaling 11 Plant Physiol. 2007. V. 145. N. l.P. 183−191.
- Smith S.E., Read D.J. Mycorrhizal symbiosis // United Kingdom. London: Academic Press. 1997. 2nd ed.
- Stacey G., Libault M., Brechenmacher L., Wan J., May G.D. Genetics and functional genomics of legume nodulation II Curr. Opin. Plant Biol. 2006. V. 9. N. 2. P. 110−121.
- Stougaard J. Genetics and genomics of root symbiosis // Curr. Opin. Plant Biol. 2001. Vol. 4. P. 328−335.
- Szczyglowski K., Shaw R.S., Wopereis J., Copeland S., Hamburger D., Kasiborski В., Dazzo F.B., de Brujin F.J. Nodule organogenesis and symbiotic mutants of the model Legume Lotus japonicus II Mol. Plant-Microbe Interact. 1998. V. 11. P. 684−697.
- Tan Y.D., Fu Y.X. A novel method for estimating linkage maps // Genetics. 2006. V. 173. N. 4. P. 2383−2390.
- Tan Y.D., Fu Y.X. A new strategy for estimating recombination fractions between dominant markers from an F2 population // Genetics. 2007. V. 175. N. 2. P. 923−931.
- Tanksley S.D., Ganal M.W., Martin G.B. Chromosome landing: a paradigm for map-based gene cloning in plants with large genomes // Trends Biotechnol. 1995. V. 11. N. 2. P. 63−68.
- Temnykh S.V., Kneen B.E., Weeden N.F., LaRue T.A. Localization of nod-3, a gene conditioning hypernodulation, and identification of a novel translocation in Pisum sativum L. cv. Rondo // J. Heredity 1995. V. 86. P. 303−305.
- Thykjaer Т., Finnemann J., Schauser L., Christensen L., Poulsen C., Stougaard J. Gene targeting approaches using positive-negative selection and large flanking regions. Plant Mol Biol. 1997. V. 35. N. 4. P. 523−530.
- Timmers A.C.J., Auriac M-C., Truchet G. Refined analysis of early symbiotic steps of the Rhizobium-Medicago interaction in relationship with microtubular cytoskeleton rearrangements//Development. 1999. V. 126. P. 3617−3628.
- Truchet G., Barker D.G., Camut S., de Billy F., Vasse J., Huguet T. Alfalfa nodulation in the absence of Rhizobium // Mol. Gen. Genet. 1989. V. 219. P. 65−68.
- Tsyganov V.E., Borisov A.Y., Rozov S.M., Tikhonovich I.A. New symbiotic mutants of pea obtained after mutagenesis of line SGE // Pisum Genet. 1994. V. 26, P. 36−37.
- Tsyganov V.E., Morzhina E.V., Stefanov S.Y., Borisov A.Y., Lebsky V.K., Tikhonovich I.A. New pea (Pisum sativum L.) genes sym33 and sym40 control infection thread formation and root nodule function// Mol. Gen. Genet. 1998. V. 256. P. 491−503.
- Tsyganov V.E., Pavlova Z.B., Kravchenko L.V., Rozov S.M., Borisov A.Y., Lutova L.A., Tikhonovich I.A. New gene Crt (curly roots) controlling pea (Pisum sativum L.) root development. // Annals of Botany. 2000. V. 86. N. 6. P. 975−981.
- Tsyganov Y.E., Borisov A.Y., Tikhonovich I.A. Fix- mutants RisFixA and RisFixV carry mutations in newly identified pea genes sym4l and sym42, respectively // Pisum Genet.2001. V. 33. P. 36.
- Wagner E., Lykke-Andersen J. mRNA surveillance: the perfect persist // J. Cell Sci.2002. V. 115. P. 3033−3038.
- Wais R.J., Galera C., Oldroyd G., Catoira R., Penmetsa R.V., Cook D., Gough C., Denarie J., Long S.R. Genetic analysis of calcium spiking responses in nodulationmutants of medicago truncatula И Proc. Natl. Acad. Sci. USA. 2000. V. 97. P. 1 340 713 412.
- Walker S.A., Viprey V., Downie J.A. Dissection of nodulation signaling using pea mutants defective for calcium spiking induced by Nod factors and chitin oligomers // Proc. Natl. Acad. Sci. USA. 2000. Vol. 97, No. 24. P. 13 413−13 418.
- Wan J., Zhang X.C., Neece D., Ramonell K.M., Clough S., Kim S.Y., Stacey M.G., Staccy G. A LysM receptor-like kinase plays a critical role in chitin signaling and fungal resistance in Arabidcpsis II Plant Cell. 2008. V. 20. N. 2. P. 471−481.
- Wang H., Qi M., Cutler A. J. A simple method of preparing plant samples for PCR // Nucleic Acids Reserch. 1993. Vol. 21. N. 17. P. 4153−4154.
- Weeden N.F., Kneen B.E., LaRue T.A. Genetic analysis of sym genes and other nodule-related genes in Pisum sativum II Nitrogen Fixation: Achievements and Objectives. / Eds. P.M. Gresshoff et al. N.Y., L.: Chapman and Hall. 1990. P. 323−330.
- Weeden N.F., Swiecicki W.K., Ambrose M., Timmerman G.M. Linkage groups of pea // Pisum Genet. 1993. V. 25. P. 4.
- Weeden N.F., Swiecicki W.K., Timmerman-Vaughan G.M., Ellis T.H.N., Ambrose M. The current pea linkage map // Pisum Genet. 1996. V. 28. P. 1−4.
- Weeden N.F., Ellis T.H.N., Timmerman-Vaughan G.M., Swiecicki W.K., Rozov S.M., Berdnikov V.A. A consensus linkage map for Pisum sativum II Pisum Genet. 1998. V. 30. P. 1−4.
- Weeden N.F., Tongue M., Boone W.F. Mapping coding sequences in pea by PCR // Pisum Genet. 1999. V. 31. P. 30−32.
- Weeden N.F., Moffet M. Identification of genes affecting root mass and root/ shoot ratio in a JI1794 x 'Slow' R1L population // Pisum Genet. 2002. V. 34. P. 28−31.
- Weeden N.F. Fs and U appear to be alleles of a locus near the end of linkage group V // Pisum Genet. 2006. V. 38. P. 23−28.
- Wessler S.R. Transposable elements and the evolution of eukaryotic genomes // Proc. Natl. Acad. Sci. USA. 2006. V. 103. N. 47. P. 17 600−17 601.
- Wu C., Sun S., Nimmakayala P., Santos F.A., Meksem K., Springman R., Ding K., Lightfoot D.A., Zhang H.B. А ВАС- and BIBAC-based physical map of the soybean genome // Genome Res. 2004. V. 14. N. 2. P. 319−326.
- Young, J.P.W. Linkage of sym-2, the symbiotic specificity locus of Pisum sativum II J. Hered. 1985. V. 76. P. 207−208.
- Young N.D., Cannon S.B., Sato S., Kim D., Cook D.R., Town C.D., Roe B.A., Tabata S. Sequencing the genespaces of Medicago truncatula and Lotus japonicus II Plant Physiol. 2005. V. 137. N. 4. P. 1174−1181.
- Young N.D., Shoemaker R.C. Genome studies and molecular genetics. Part 1: Model legumes. Exploring the structure, function and evolution of legume genomes // Curr. Opin. Plant Biol. 2006. V. 9. N. 2. P. 95−98.
- Zhu H., Choi H.K., Cook D.R., Shoemaker R.C. Bridging model and crop legumes-through comparative genomics // Plant Physiol. 2005. V. 137. N. 4. P. 1189−1196.
- Zhukov V.A., Borisov A.Y., Tikhonovich I.A. Pea mutant line Sprint-2Nod-3 represents a new mutant allele of pea symbiotic gene syml9 II Pisum Genet. 2007b. V. 39. P. 27.
- Автор выражает благодарность сотрудникам лаборатории Генной экспрессии Университета Орхуса (Дания) Симоне Радутоиу (Simona Radutoiu), Лине Мадсен (Lene Н.
- Madsen) и Иенсу Стоугаарду (Jens Stougaard) за теплый прием вдали от родного дома, чуткое руководство и бесценный опыт научной работы на мировом уровне.